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Study Type: simulation/modelling

1 to 10 of 278 Results

Code for "Mesoscale eddies heterogeneously modulate CO₂ fluxes in eddy-rich regions of the Southern Ocean" Jun 27, 2025 Salinas, Mariana, 2025, "Code for "Mesoscale eddies heterogeneously modulate CO₂ fluxes in eddy-rich regions of the Southern Ocean"", https://doi.org/10.17617/3.LQT15X, Edmond, V1 This dataset provides the Python scripts used for the analysis in the manuscript titled "Mesoscale eddies heterogeneously modulate CO₂ fluxes in eddy-rich regions of the Southern Ocean," submitted to Biogeosciences (BG), a Copernicus journal.
Data for Combined X-ray Emission Spectroscopy at Phosphorus and Nickel: Detecting Subtle Changes in Catalyst Electronic Structure at High Resolution Jun 26, 2025 Mathe, Zachary Shane; DeBeer, Serena, 2025, "Data for Combined X-ray Emission Spectroscopy at Phosphorus and Nickel: Detecting Subtle Changes in Catalyst Electronic Structure at High Resolution", https://doi.org/10.17617/3.NINN3Q, Edmond, V1 Data supporting the publication "Combined X-ray Emission Spectroscopy at Phosphorus and Nickel: Detecting Subtle Changes in Catalyst Electronic Structure at High Resolution", including experimental data, calculated data, and ORCA input files.
MD simulation datasets of the article “Functional in vitro diversity of an intrinsically disordered plant protein during freeze–thawing is encoded by its structural plasticity” Jun 16, 2025 Rindfleisch, Tobias, 2025, "MD simulation datasets of the article “Functional in vitro diversity of an intrinsically disordered plant protein during freeze–thawing is encoded by its structural plasticity”", https://doi.org/10.17617/3.G8TPPM, Edmond, V1 Intrinsically disordered late embryogenesis abundant (LEA) proteins play a central role in the tolerance of plants and other organisms to dehydration brought upon, for example, by freezing temperatures, high salt concentration, drought or desiccation, and many LEA proteins have been found to stabilize dehydration-sensitive cellular structures. Thei...
Predicting Electrolyzer Performance under Forced Periodic Operation using Nonlinear Frequency Response Method Jun 12, 2025 Milicic, Tamara; Puteanus, Simon; Xenia Becker; Steffen Bernet; Vidakovic-Koch, Tanja, 2025, "Predicting Electrolyzer Performance under Forced Periodic Operation using Nonlinear Frequency Response Method", https://doi.org/10.17617/3.FEEHJO, Edmond, V1 Industrial-scale electrolyzers are supplied by power converters with a mixture of DC current and superimposed current ripple. Therefore, electrolyzers are inevitably operated in a forced periodic regime. On the other hand, pulsed electrolysis, as a type of forced periodic operation, emerged as an attractive process intensification strategy. While t...
Data for: Automated Generation of Structure Datasets for Machine Learning Potentials and Alloys Jun 10, 2025 Poul, Marvin, 2024, "Data for: Automated Generation of Structure Datasets for Machine Learning Potentials and Alloys", https://doi.org/10.17617/3.DYLLSS, Edmond, V5 DFT Training Data for fitting Moment Tensor Potentials for the system Mg/Al/Ca. See https://github.com/eisenforschung/mgalca-mtp-data for further notes and usage examples.
Photodynamic Ocular Drug Delivery System with Optical Coherence Tomography Oriented Microscale Robots Jun 7, 2025 Yildiz, Erdost, 2024, "Photodynamic Ocular Drug Delivery System with Optical Coherence Tomography Oriented Microscale Robots", https://doi.org/10.17617/3.J0N7UW, Edmond, V2 Retinal diseases are the most common reason for irreversible blindness worldwide. Common retinal diseases, such as diabetic retinopathy, macular degeneration, retinal vein occlusion, and non-infectious uveitis, mostly require intravitreal steroid injections in clinical management. Unfortunately, the intravitreal steroid injections, lead to other im...
Data of study "Homeorhetic regulation of cellular phenotype" Jun 6, 2025 Koch, Daniel, 2025, "Data of study "Homeorhetic regulation of cellular phenotype"", https://doi.org/10.17617/3.2PSNO9, Edmond, V1 Simulation data of Epidermal Growth Factor Receptor (EGFR) network model used for the analyses in the study "Homeorhetic regulation of cellular phenotype". The code to generate this data can be found on the github repository: https://github.com/maneesh51/Homeorhesis
Data and Code to Reproduce "STbayes: An R package for creating, fitting and understanding Bayesian models of social transmission" Jun 5, 2025 Chimento, Michael; Hoppitt, William, 2025, "Data and Code to Reproduce "STbayes: An R package for creating, fitting and understanding Bayesian models of social transmission"", https://doi.org/10.17617/3.IY3TKX, Edmond, V1 This repository provides the data and code necessary to reproduce the manuscript "STbayes: An R package for creating, fitting and understanding Bayesian models of social transmission" by Michael Chimento and William Hoppitt.
ACROSS_Mecca_model_output May 23, 2025 Sander, Rolf; Andersen, Simone Thirstrup, 2025, "ACROSS_Mecca_model_output", https://doi.org/10.17617/3.NZ3XZG, Edmond, V1 Box model output when optimizing agreement between modelled and measured peroxycarboxylic nitric anhydrides during the ACROSS campaign. 9 days of spin-up time was used to ensure steady state of all trace gasses not constrained in the model.
Codes and data for "Unveiling the hidden warming layer: Metre-scale clear-sky radiative effects at stratocumulus cloud top" May 15, 2025 Chan, Kenneth, 2025, "Codes and data for "Unveiling the hidden warming layer: Metre-scale clear-sky radiative effects at stratocumulus cloud top"", https://doi.org/10.17617/3.6FSMWG, Edmond, V2 Codes and data for "Unveiling the hidden warming layer: Metre-scale clear-sky radiative effects at stratocumulus cloud top" Thermodynamic profiles are generated with the direct numerical simulation tlab. Radiative transfer profiles are calculated with the model ARTS.

Code for "Mesoscale eddies heterogeneously modulate CO₂ fluxes in eddy-rich regions of the Southern Ocean"

Jun 27, 2025

Salinas, Mariana, 2025, "Code for "Mesoscale eddies heterogeneously modulate CO₂ fluxes in eddy-rich regions of the Southern Ocean"", https://doi.org/10.17617/3.LQT15X, Edmond, V1

This dataset provides the Python scripts used for the analysis in the manuscript titled "Mesoscale eddies heterogeneously modulate CO₂ fluxes in eddy-rich regions of the Southern Ocean," submitted to Biogeosciences (BG), a Copernicus journal.

Data for Combined X-ray Emission Spectroscopy at Phosphorus and Nickel: Detecting Subtle Changes in Catalyst Electronic Structure at High Resolution

Jun 26, 2025

Mathe, Zachary Shane; DeBeer, Serena, 2025, "Data for Combined X-ray Emission Spectroscopy at Phosphorus and Nickel: Detecting Subtle Changes in Catalyst Electronic Structure at High Resolution", https://doi.org/10.17617/3.NINN3Q, Edmond, V1

Data supporting the publication "Combined X-ray Emission Spectroscopy at Phosphorus and Nickel: Detecting Subtle Changes in Catalyst Electronic Structure at High Resolution", including experimental data, calculated data, and ORCA input files.

MD simulation datasets of the article “Functional in vitro diversity of an intrinsically disordered plant protein during freeze–thawing is encoded by its structural plasticity”

Jun 16, 2025

Rindfleisch, Tobias, 2025, "MD simulation datasets of the article “Functional in vitro diversity of an intrinsically disordered plant protein during freeze–thawing is encoded by its structural plasticity”", https://doi.org/10.17617/3.G8TPPM, Edmond, V1

Intrinsically disordered late embryogenesis abundant (LEA) proteins play a central role in the tolerance of plants and other organisms to dehydration brought upon, for example, by freezing temperatures, high salt concentration, drought or desiccation, and many LEA proteins have been found to stabilize dehydration-sensitive cellular structures. Thei...

Predicting Electrolyzer Performance under Forced Periodic Operation using Nonlinear Frequency Response Method

Jun 12, 2025

Milicic, Tamara; Puteanus, Simon; Xenia Becker; Steffen Bernet; Vidakovic-Koch, Tanja, 2025, "Predicting Electrolyzer Performance under Forced Periodic Operation using Nonlinear Frequency Response Method", https://doi.org/10.17617/3.FEEHJO, Edmond, V1

Industrial-scale electrolyzers are supplied by power converters with a mixture of DC current and superimposed current ripple. Therefore, electrolyzers are inevitably operated in a forced periodic regime. On the other hand, pulsed electrolysis, as a type of forced periodic operation, emerged as an attractive process intensification strategy. While t...

Data for: Automated Generation of Structure Datasets for Machine Learning Potentials and Alloys

Jun 10, 2025

Poul, Marvin, 2024, "Data for: Automated Generation of Structure Datasets for Machine Learning Potentials and Alloys", https://doi.org/10.17617/3.DYLLSS, Edmond, V5

DFT Training Data for fitting Moment Tensor Potentials for the system Mg/Al/Ca. See https://github.com/eisenforschung/mgalca-mtp-data for further notes and usage examples.

Photodynamic Ocular Drug Delivery System with Optical Coherence Tomography Oriented Microscale Robots

Jun 7, 2025

Yildiz, Erdost, 2024, "Photodynamic Ocular Drug Delivery System with Optical Coherence Tomography Oriented Microscale Robots", https://doi.org/10.17617/3.J0N7UW, Edmond, V2

Retinal diseases are the most common reason for irreversible blindness worldwide. Common retinal diseases, such as diabetic retinopathy, macular degeneration, retinal vein occlusion, and non-infectious uveitis, mostly require intravitreal steroid injections in clinical management. Unfortunately, the intravitreal steroid injections, lead to other im...

Data of study "Homeorhetic regulation of cellular phenotype"

Jun 6, 2025

Koch, Daniel, 2025, "Data of study "Homeorhetic regulation of cellular phenotype"", https://doi.org/10.17617/3.2PSNO9, Edmond, V1

Simulation data of Epidermal Growth Factor Receptor (EGFR) network model used for the analyses in the study "Homeorhetic regulation of cellular phenotype". The code to generate this data can be found on the github repository: https://github.com/maneesh51/Homeorhesis

Data and Code to Reproduce "STbayes: An R package for creating, fitting and understanding Bayesian models of social transmission"

Jun 5, 2025

Chimento, Michael; Hoppitt, William, 2025, "Data and Code to Reproduce "STbayes: An R package for creating, fitting and understanding Bayesian models of social transmission"", https://doi.org/10.17617/3.IY3TKX, Edmond, V1

This repository provides the data and code necessary to reproduce the manuscript "STbayes: An R package for creating, fitting and understanding Bayesian models of social transmission" by Michael Chimento and William Hoppitt.

ACROSS_Mecca_model_output

May 23, 2025

Sander, Rolf; Andersen, Simone Thirstrup, 2025, "ACROSS_Mecca_model_output", https://doi.org/10.17617/3.NZ3XZG, Edmond, V1

Box model output when optimizing agreement between modelled and measured peroxycarboxylic nitric anhydrides during the ACROSS campaign. 9 days of spin-up time was used to ensure steady state of all trace gasses not constrained in the model.

Codes and data for "Unveiling the hidden warming layer: Metre-scale clear-sky radiative effects at stratocumulus cloud top"

May 15, 2025

Chan, Kenneth, 2025, "Codes and data for "Unveiling the hidden warming layer: Metre-scale clear-sky radiative effects at stratocumulus cloud top"", https://doi.org/10.17617/3.6FSMWG, Edmond, V2

Codes and data for "Unveiling the hidden warming layer: Metre-scale clear-sky radiative effects at stratocumulus cloud top" Thermodynamic profiles are generated with the direct numerical simulation tlab. Radiative transfer profiles are calculated with the model ARTS.

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