1 to 8 of 8 Results
Oct 7, 2024
Kullmann, Richard; Weikl, Thomas, 2023, "Force-field-based energy minimizations of cellulose crystals", https://doi.org/10.17617/3.1FPW2C, Edmond, V2
Structures and energy terms for cellulose Ibeta and II crystals composed of 52 chains of cellulose 6-mers, 8-mers, 10-mers, or 12-mers obtained from energy minimizations in two force fields. |
Aug 8, 2024
Tam, Nicky Wai-Kay; Dimova, Rumiana; Cipitria, Prof. Amaia, 2024, "Breast cancer cell-derived extracellular vesicles accelerate collagen fibrillogenesis and integrate into the matrix", https://doi.org/10.17617/3.AMI3GV, Edmond, V1
Rheometry of collagen I hydrogels formed in the presence of extracellular vesicles, extruded plasma membrane vesicles, and synthetic liposomes; combined confocal reflectance imaging of collagen I fibrils and fluorescence confocal imaging of labelled vesicles, with processed data... |
Jul 11, 2024
Bonazzi, Francesco; Weikl, Thomas, 2024, "Pair distributions and membrane-mediated interactions of arc-shaped particles on spherical and tubular vesicles", https://doi.org/10.17617/3.DIF595, Edmond, V1
This dataset contains data from Monte Carlo simulations of triangulated membrane vesicles with segmented, bound arc-shaped particles of two different sizes (in hdf5 format) and Mathematica notebooks to determine pair distributions, 2-dimensional free energy landscapes, and 1-dime... |
Mar 26, 2024
Awad, Sherine; Valleriani, Angelo; Chiarugi, Davide, 2024, "A data-driven estimation of the ribosome drop-off rate in S. cerevisiae reveals a correlation with the genes length.", https://doi.org/10.17617/3.H7OPIB, Edmond, V1
Ribofilio is a software package that estimates the drop-off rate of ribosomes. It is a python package that takes as a required input the reference genome and the footprint. If the mRNA reads are available, this can be used as an optional parameter for normalization. The tool uses... |
Aug 25, 2023
Dimova, Rumiana, 2023, "Photomanipulation of minimal synthetic cells: area increase, softening and interleaflet coupling of membrane models doped with azobenzene-lipid photoswitches", https://doi.org/10.17617/3.CWOZQO, Edmond, V1
Supporting data (simulation files, movies) for Aleksanyan et al. (2023) Advanced Science |
Apr 21, 2023
Raguin, Emeline; Richard Weinkamer; Clemens Schmitt; Luca Curcuraci; Peter Fratzl, 2023, "Logistics of bone mineralization in the chick embryo studied by 3D cryo FIB-SEM imaging", https://doi.org/10.17617/3.TBB26J, Edmond, V1
Raw FIBSEM dataset used in the study of bone mineralization logistics in the chick embryo at EDD13. |
Nov 22, 2022
Taïeb, Hubert M.; Herment, Guillaume; Robison, Tom; Cipitria, Amaia, 2022, "Effect of capillary fluid flow on single cancer cell cycle dynamics, motility, volume and morphology", https://doi.org/10.17617/3.658NWI, Edmond, V1
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Nov 21, 2022
Rozycki, Bartosz; Weikl, Thomas; Pettmann, Johannes; van der Merwe, P. Anton; Dushek, Omer, 2022, "Data from structure-based coarse-grained MD simulations of TCR/pMHC unbinding for a large range of pulling velocities", https://doi.org/10.17617/3.2VLJ6X, Edmond, V1
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