1 to 10 of 14 Results
Apr 29, 2025
Nerli, Elisa; Liu, Jinghui, 2025, "Injury-induced electrochemical coupling triggers regenerative cell proliferation - DATA", https://doi.org/10.17617/3.6WBOSZ, Edmond, V1
Data for the paper "Injury-induced electrochemical coupling triggers regenerative cell proliferation" |
Apr 15, 2025
Nakade, Uday; Manuel Spitschan, 2025, "Predicting visual field boundaries from head features – Supplementary material", https://doi.org/10.17617/3.N6QSJP, Edmond, V2
Data for Nakade, U. & Spitschan, M. (2025). Predicting visual field boundaries from head features. Journal of the Optical Society of America A, 42(6). https://doi.org/10.1364/JOSAA.551858. See README.md file. The code used to generate the data is available at this GitHub repository (https://github.com/tscnlab/NakadeEtAl_JOptSocAmA_2025) and archive... |
Oct 7, 2024
Kullmann, Richard; Weikl, Thomas, 2023, "Force-field-based energy minimizations of cellulose crystals", https://doi.org/10.17617/3.1FPW2C, Edmond, V2
Structures and energy terms for cellulose Ibeta and II crystals composed of 52 chains of cellulose 6-mers, 8-mers, 10-mers, or 12-mers obtained from energy minimizations in two force fields. |
Aug 2, 2024
Joseph, David; Griesinger, Christian, 2024, "Library of optimal control pulse sequences for biomolecular NMR spectroscopy", https://doi.org/10.17617/3.CBOUXH, Edmond, V1
This data set is part of the publication Library of optimal control pulse sequences for biomolecular NMR spectroscopy (manuscript in preparation). by D. Joseph and C. Griesinger. All reported pulse sequence codes and the necessary parameter files and additional OC pulse shapes are provided to reproduce the results on a Bruker Avance Neo 1200 MHz us... |
Mar 26, 2024
Awad, Sherine; Valleriani, Angelo; Chiarugi, Davide, 2024, "A data-driven estimation of the ribosome drop-off rate in S. cerevisiae reveals a correlation with the genes length.", https://doi.org/10.17617/3.H7OPIB, Edmond, V1
Ribofilio is a software package that estimates the drop-off rate of ribosomes. It is a python package that takes as a required input the reference genome and the footprint. If the mRNA reads are available, this can be used as an optional parameter for normalization. The tool uses as well several other optional parameters like the bin size, plotting... |
Feb 20, 2024
Girard, Martin; Olvera de la Cruz, Monica; Marko, John; Erbas, Aykut, 2024, "Heterogeneous flexibility can contribute to chromatin segregation in the cell nucleus", https://doi.org/10.17617/3.P08YSZ, Edmond, V1
Dataset for ring polymers under confinement as a model for chromatin in the cell nucleus |
Oct 7, 2023
Anggara, Kelvin, 2023, "STM images and DFT structures of glycoconjugates", https://doi.org/10.17617/3.3F5JPU, Edmond, V2
Raw STM images of glycans and glycoconjugates were given in the SXM format outputted directly from the Nanonis control software, which can be opened using WSXM or Gwyddion. Computed structures were given in XYZ format, which can be opened by common molecular modeling software such as VMD, VESTA, Avogadro, ChimeraX, etc. |
Dimova, Rumiana, 2023, "Photomanipulation of minimal synthetic cells: area increase, softening and interleaflet coupling of membrane models doped with azobenzene-lipid photoswitches", https://doi.org/10.17617/3.CWOZQO, Edmond, V1
Supporting data (simulation files, movies) for Aleksanyan et al. (2023) Advanced Science |
Steiert, Frederik; Schultz, Peter; Höfinger, Siegfried; Müller, Thomas; Schwille, Petra; Weidemann, Thomas, 2022, "Ratiometric Segmentation Script", https://doi.org/10.17617/3.YDSJ2C, Edmond, V2
ImageJ plugin for cell membrane segmentation of multi-channel confocal images, written by Giovanni Cardone (MPI of Biochemistry, Imaging Facility). |
Taïeb, Hubert M.; Herment, Guillaume; Robison, Tom; Cipitria, Amaia, 2022, "Effect of capillary fluid flow on single cancer cell cycle dynamics, motility, volume and morphology", https://doi.org/10.17617/3.658NWI, Edmond, V1
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